C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: seizure related gene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151982 Sez6-007 ENSMUSG00000000632 10090 + 11:77953853-77979048 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000151982
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000151982 0.859±0.66 0.260±0.09 0.022±0.00 12.381±2.13 0.198±0.08 0.210±0.12 0.062±0.03 0.033±0.01 0.015±0.01 0.055±0.01 0.075±0.05 0.508±0.22 0.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076L CIL_00076L_0003 CGP 11:77880615-77979048
CIL_0006M6 CIL_0006M6_0002 CGP 11:77930800-78030539

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317338 SEZ6-002 protein_coding Homo_sapiens 0 2084
ENST00000335960 SEZ6-201 protein_coding Homo_sapiens 0 2058
ENST00000360295 SEZ6-001 protein_coding Homo_sapiens 0 1980
ENST00000442608 SEZ6-012 protein_coding Homo_sapiens 0 1402
ENST00000539265 SEZ6-013 protein_coding Homo_sapiens 0 444
ENST00000540419 SEZ6-006 nonsense_mediated_decay Homo_sapiens 0 3186
ENST00000540632 SEZ6-003 protein_coding Homo_sapiens 0 1980
ENST00000544224 SEZ6-011 retained_intron Homo_sapiens 0 667

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