C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptotagmin VI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151985 Syt6-007 ENSMUSG00000027849 10090 + 3:103575378-103630927 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastPlacentaENSMUST00000151985
Transcript ID Adipose Brain Breast Placenta
ENSMUST00000151985 0.056±0.01 5.829±0.00 0.065±0.00 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006X0 CIL_0006X0_0002 CGP 3:103575231-103738001

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369547 SYT6-201 protein_coding Homo_sapiens 0 1705
ENST00000607941 SYT6-001 protein_coding Homo_sapiens 0 1705
ENST00000608203 SYT6-006 protein_coding Homo_sapiens 0 846
ENST00000609117 SYT6-007 protein_coding Homo_sapiens 0 1709
ENST00000610096 SYT6-002 nonsense_mediated_decay Homo_sapiens 0 1705
ENST00000610121 SYT6-003 nonsense_mediated_decay Homo_sapiens 0 1668
ENST00000610222 SYT6-004 protein_coding Homo_sapiens 0 1707

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