C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | prenyl (solanesyl) diphosphate synthase, subunit 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000152170  |
Pdss1-002 |
ENSMUSG00000026784 |
10090 | + |
2:22895595-22916213  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000R4 | CIL_0000R4_0002 | CGP | 2:22774094-22940266 |
| CIL_0000R7 | CIL_0000R7_0002 | CGP | 2:22895522-23040241 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005739 | IDA | mitochondrion |
| GO:0008299 | IEA | isoprenoid biosynthetic process |
| GO:0050347 | IDA | trans-octaprenyltranstransferase activity |
| GO:0051290 | IPI | protein heterotetramerization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000376215
|
PDSS1-001 | protein_coding | Homo_sapiens | 0 | 758 |
|
ENST00000422953
|
PDSS1P1-001 | processed_pseudogene | Homo_sapiens | 0 | 623 |
|
ENST00000473224
|
PDSS1-004 | processed_transcript | Homo_sapiens | 0 | 377 |
|
ENST00000491711
|
PDSS1-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 363 |
