C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000R7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148459-ENSG00000136754 CGP 9606 10:26697659-26861087
GeneTranscriptPositionBiotype
ENSG00000148459 (PDSS1)
prenyl (decaprenyl) diphosphate synthase, subunit 1 		ENST00000376215 (PDSS1-001) 26697659-26746798 protein_coding
ENST00000470978 (PDSS1-003) 26734651-26746782 processed_transcript
ENST00000473224 (PDSS1-004) 26705308-26724019 processed_transcript
ENST00000491711 (PDSS1-002) 26720343-26746541 nonsense_mediated_decay
ENSG00000206605 (RNU6-946P)
RNA, U6 small nuclear 946, pseudogene 		ENST00000383878 (RNU6-946P-201) 26790540-26790646 snRNA
ENSG00000223027 (SNORA57)
Small nucleolar RNA SNORA57 		ENST00000411095 (SNORA57.1-203) 26789017-26789157 snoRNA
ENSG00000234788 (HSPA8P3)
heat shock 70kDa protein 8 pseudogene 3 		ENST00000449300 (HSPA8P3-001) 26714622-26715832 processed_pseudogene
ENSG00000235843 (RP13-16H11.5)
 ENST00000458171 (RP13-16H11.5-001) 26717635-26718778 antisense
CIL_0000R7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026784-ENSMUSG00000058835 CGP 10090 2:22895522-23040241
GeneTranscriptPositionBiotype
ENSMUSG00000026784 (Pdss1)
prenyl (solanesyl) diphosphate synthase, subunit 1 		ENSMUST00000053729 (Pdss1-001) 22895522-22940266 protein_coding
ENSMUST00000135621 (Pdss1-005) 22895619-22901830 nonsense_mediated_decay
ENSMUST00000139472 (Pdss1-003) 22934123-22940255 retained_intron
ENSMUST00000141215 (Pdss1-004) 22896048-22906824 protein_coding
ENSMUST00000148072 (Pdss1-006) 22895522-22912699 processed_transcript
ENSMUST00000149229 (Pdss1-007) 22935559-22940242 nonsense_mediated_decay
ENSMUST00000152170 (Pdss1-002) 22895595-22916213 protein_coding
ENSMUSG00000058835 (Abi1)
abl-interactor 1 		ENSMUST00000078977 (Abi1-009) 22940369-23040230 protein_coding
ENSMUST00000091394 (Abi1-005) 22940364-23040137 protein_coding
ENSMUST00000093171 (Abi1-010) 22940892-23040140 protein_coding
ENSMUST00000114544 (Abi1-006) 22940369-23040185 protein_coding
ENSMUST00000123948 (Abi1-004) 22940308-23040122 protein_coding
ENSMUST00000126112 (Abi1-003) 22940073-23040195 protein_coding
ENSMUST00000135308 (Abi1-015) 22941808-22947210 retained_intron
ENSMUST00000139038 (Abi1-011) 22940364-23040187 protein_coding
ENSMUST00000140164 (Abi1-001) 22940073-23040241 protein_coding
ENSMUST00000148294 (Abi1-014) 22941812-22950302 retained_intron
ENSMUST00000149719 (Abi1-002) 22940086-23040241 protein_coding
ENSMUST00000153931 (Abi1-007) 22940364-23040104 protein_coding
ENSMUST00000154162 (Abi1-012) 22950226-22962611 retained_intron
ENSMUST00000156344 (Abi1-013) 22946683-22960852 retained_intron
ENSMUST00000178908 (Abi1-201) 22941233-23040219 protein_coding
ENSMUSG00000081861 (Gm14441)
predicted gene 14441 		ENSMUST00000121960 (Gm14441-001) 22913293-22913832 processed_pseudogene
ENSMUSG00000083650 (Gm13357)
predicted gene 13357 		ENSMUST00000120528 (Gm13357-001) 23019131-23019667 processed_pseudogene
ENSMUSG00000084625 (Gm25544)
predicted gene, 25544 		ENSMUST00000122676 (Gm25544-201) 22902388-22902507 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000R7_0001ENSG00000148459ENST00000376215ENST00000470978ENST00000473224ENST00000491711ENSG00000206605ENST00000383878ENSG00000223027ENST00000411095ENSG00000234788ENST00000449300ENSG00000235843ENST00000458171CIL_0000R7_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000R7_0001ENSG00000148459ENST00000376215ENST00000491711ENSG00000206605ENST00000383878ENSG00000223027ENST00000411095ENSG00000234788ENST00000449300ENSG00000235843ENST00000458171CIL_0000R7_0002ENSMUSG00000026784ENSMUST00000053729ENSMUST00000139472ENSMUST00000148072ENSMUSG00000058835ENSMUST00000078977ENSMUST00000091394ENSMUST00000093171ENSMUST00000114544ENSMUST00000126112ENSMUST00000139038ENSMUST00000140164ENSMUST00000149719ENSMUST00000153931ENSMUST00000154162ENSMUST00000156344ENSMUST00000178908ENSMUSG00000081861ENSMUST00000121960ENSMUSG00000083650ENSMUST00000120528ENSMUSG00000084625ENSMUST00000122676
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148459 ENST00000376215 N/A N/A N/A N/A N/A N/A N/A 2.314±0.00 2.416±0.00 N/A 2.281±0.00 9.984±0.00 N/A N/A
ENST00000470978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.146±0.00 N/A N/A N/A
ENSG00000206605 ENST00000383878 N/A 0.413±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223027 ENST00000411095 N/A N/A N/A N/A N/A N/A N/A N/A 28.689±0.00 N/A 4.388±0.00 N/A N/A N/A
ENSG00000234788 ENST00000449300 N/A 0.159±0.00 0.493±0.00 0.342±0.00 N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.079±0.04 0.040±0.00 N/A
ENSG00000235843 ENST00000458171 0.020±0.00 0.074±0.00 N/A 0.093±0.00 0.146±0.10 N/A 0.036±0.00 N/A N/A 0.100±0.00 N/A 0.098±0.08 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026784 ENSMUST00000053729 N/A N/A N/A N/A N/A 11.662±2.29 7.507±0.68 6.958±1.09 14.044±5.42 N/A 4.078±0.71 N/A 11.827±3.72 N/A
ENSMUST00000135621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139472 N/A N/A N/A 8.322±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148072 N/A 14.472±3.41 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000058835 ENSMUST00000078977 N/A N/A N/A 7.191±1.32 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000091394 7.132±1.07 5.072±0.72 13.284±0.08 9.516±1.17 5.549±1.35 N/A 4.497±0.42 N/A 4.364±0.86 11.689±2.48 2.716±0.50 7.325±1.26 N/A 1.659±0.01
ENSMUST00000093171 6.868±0.86 N/A N/A 8.347±1.06 4.805±0.98 7.040±0.26 N/A 5.185±0.92 4.151±0.00 8.082±0.00 N/A 6.384±0.53 4.389±0.00 2.834±0.37
ENSMUST00000114544 N/A N/A 7.397±0.00 N/A 7.123±2.64 11.533±1.66 N/A N/A 9.568±3.82 8.630±0.46 N/A 6.620±0.50 9.071±3.07 N/A
ENSMUST00000123948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126112 N/A 3.767±0.00 9.971±0.22 5.885±0.46 N/A N/A N/A 4.451±0.53 4.711±1.17 6.177±0.00 1.304±0.15 10.663±2.84 7.166±0.36 N/A
ENSMUST00000135308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139038 N/A N/A N/A 7.678±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.643±0.00
ENSMUST00000140164 7.698±1.13 5.020±0.91 N/A N/A 5.621±0.08 9.135±1.37 2.184±0.00 5.598±0.57 6.071±1.23 7.891±0.44 N/A 6.410±1.10 6.329±0.89 2.126±0.26
ENSMUST00000148294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149719 N/A N/A N/A N/A N/A 9.779±2.32 N/A N/A 4.459±0.92 N/A N/A N/A N/A N/A
ENSMUST00000153931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.103±0.00 N/A N/A
ENSMUST00000154162 N/A 11.348±1.22 N/A N/A 13.772±0.00 N/A N/A N/A N/A N/A N/A 35.285±8.68 N/A N/A
ENSMUST00000156344 N/A 17.702±3.45 N/A 101.594±0.00 23.072±2.96 47.551±15.15 N/A 16.068±1.24 16.346±2.08 26.014±0.00 N/A 38.285±17.61 60.328±0.00 N/A
ENSMUST00000178908 10.536±1.90 6.412±1.18 N/A 13.088±0.00 5.288±1.04 11.460±0.00 3.559±0.41 3.840±0.25 4.721±0.37 13.755±4.90 1.741±0.11 6.721±0.32 14.684±2.62 3.100±0.51
ENSMUSG00000081861 ENSMUST00000121960 0.397±0.04 0.288±0.02 0.061±0.02 0.478±0.11 0.247±0.09 0.244±0.02 0.144±0.05 0.402±0.25 0.199±0.09 0.154±0.02 0.087±0.03 0.311±0.14 0.143±0.04 N/A
ENSMUSG00000083650 ENSMUST00000120528 0.339±0.09 N/A 0.087±0.03 0.367±0.03 0.230±0.12 0.306±0.11 N/A 0.115±0.04 0.191±0.12 0.418±0.22 0.073±0.02 0.537±0.20 0.387±0.12 0.084±0.01
ENSMUSG00000084625 ENSMUST00000122676 N/A N/A N/A 8.812±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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