C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATP-binding cassette, sub-family F (GCN20), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152339 Abcf3-004 ENSMUSG00000003234 10090 + 16:20549668-20551669 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000152339
Transcript ID Ovary
ENSMUST00000152339 14.281±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G2 CIL_0005G2_0002 CGP 16:20535478-20561379
CIL_0005FP CIL_0005FP_0002 CGP 16:20548577-20605377

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292808 ABCF3-002 protein_coding Homo_sapiens 0 756
ENST00000421340 ABCF3-010 nonsense_mediated_decay Homo_sapiens 0 394
ENST00000429586 ABCF3-001 protein_coding Homo_sapiens 0 756
ENST00000466416 ABCF3-015 retained_intron Homo_sapiens 0.0000000000006 79
ENST00000473311 ABCF3-003 retained_intron Homo_sapiens 0 647
ENST00000478288 ABCF3-013 retained_intron Homo_sapiens 0.0000000000008 79
ENST00000481116 ABCF3-014 retained_intron Homo_sapiens 4e-29 132
ENST00000498136 ABCF3-005 retained_intron Homo_sapiens 0 510

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