C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | collagen, type XX, alpha 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000152473  |
Col20a1-003 |
ENSMUSG00000016356 |
10090 | + |
2:181000454-181003458  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00045B | CIL_00045B_0002 | CGP | 2:180967225-181017540 |
| CIL_00010A | CIL_00010A_0002 | CGP | 2:180986535-181043546 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000358894
|
COL20A1-006 | protein_coding | Homo_sapiens | 0 | 198 |
|
ENST00000422202
|
COL20A1-001 | protein_coding | Homo_sapiens | 0 | 198 |
|
ENST00000479501
|
COL20A1-005 | retained_intron | Homo_sapiens | 0 | 198 |
