| Transcript ID | Brain | Ovary |
|---|---|---|
| ENST00000358894 | 0.617±0.00 | 0.049±0.02 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | collagen, type XX, alpha 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000358894  |
COL20A1-006 |
ENSG00000101203 |
9606 | + |
20:63293186-63330933  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00045B | CIL_00045B_0001 | CGP | 20:63272785-63334851 |
| CIL_00010A | CIL_00010A_0001 | CGP | 20:63293186-63378401 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0005576 | TAS | extracellular region |
| GO:0005581 | IEA | collagen trimer |
| GO:0005788 | TAS | endoplasmic reticulum lumen |
| GO:0030198 | TAS | extracellular matrix organization |
| GO:0031012 | TAS | extracellular matrix |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000149179
|
Col20a1-002 | protein_coding | Mus_musculus | 0 | 2617 |
|
ENSMUST00000108856
|
Col20a1-001 | protein_coding | Mus_musculus | 0 | 2266 |
|
ENSMUST00000152473
|
Col20a1-003 | nonsense_mediated_decay | Mus_musculus | 0 | 198 |
