C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5526
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153604 Gm5526-001 ENSMUSG00000084817 10090 - 1:45857332-45857754 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000153604
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000153604 15.664±3.54 4.683±2.07 105.107±4.60 5.365±4.00 4.278±1.50 19.677±5.26 3.045±0.61 10.953±2.20 4.084±1.70 12.714±2.55 0.333±0.13 8.426±4.36 1.563±1.21 3.614±1.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293422 MYL6-023 protein_coding Homo_sapiens 0 652
ENST00000348108 MYL6-024 protein_coding Homo_sapiens 0 612
ENST00000354968 MYL4-201 protein_coding Homo_sapiens 0 252
ENST00000393450 MYL4-001 protein_coding Homo_sapiens 0 252
ENST00000405661 MYL6B-002 retained_intron Homo_sapiens 0 285
ENST00000412707 LOC124685-001 processed_pseudogene Homo_sapiens 0 433
ENST00000429485 AC016697.2-001 processed_pseudogene Homo_sapiens 9.80909e-45 183
ENST00000436904 MYL6P3-001 processed_pseudogene Homo_sapiens 0 416
ENST00000449877 MYL6P1-001 processed_pseudogene Homo_sapiens 0 433
ENST00000450079 MYL6P2-001 processed_pseudogene Homo_sapiens 0 327
ENST00000536128 MYL6-005 protein_coding Homo_sapiens 0 610
ENST00000536623 MYL4-004 protein_coding Homo_sapiens 0 252
ENST00000545441 AC006448.1-201 protein_coding Homo_sapiens 0 433
ENST00000546630 MYL6-021 retained_intron Homo_sapiens 0 228
ENST00000546845 MYL6-009 nonsense_mediated_decay Homo_sapiens 0 281
ENST00000547408 MYL6-007 protein_coding Homo_sapiens 0 610
ENST00000547649 MYL6-002 protein_coding Homo_sapiens 0 652
ENST00000547703 MYL6-012 retained_intron Homo_sapiens 0 322
ENST00000548293 MYL6-010 protein_coding Homo_sapiens 0 612
ENST00000548400 MYL6-018 protein_coding Homo_sapiens 0 387
ENST00000548571 MYL6B-013 processed_transcript Homo_sapiens 0.00000000000006 81
ENST00000548580 MYL6-014 protein_coding Homo_sapiens 0 427
ENST00000548725 MYL6-015 retained_intron Homo_sapiens 0 496
ENST00000549017 MYL6-025 protein_coding Homo_sapiens 0 344
ENST00000549178 MYL6B-006 retained_intron Homo_sapiens 0 324
ENST00000549392 MYL6-022 protein_coding Homo_sapiens 0 582
ENST00000549566 MYL6-013 protein_coding Homo_sapiens 0 427
ENST00000550152 MYL6B-005 processed_transcript Homo_sapiens 0 285
ENST00000550184 MYL6-004 retained_intron Homo_sapiens 0 612
ENST00000550443 MYL6B-001 protein_coding Homo_sapiens 0 324
ENST00000550639 MYL6-017 processed_transcript Homo_sapiens 0 494
ENST00000550697 MYL6-003 protein_coding Homo_sapiens 0 612
ENST00000551589 MYL6-001 protein_coding Homo_sapiens 0 610
ENST00000552297 MYL6-016 processed_transcript Homo_sapiens 0 385
ENST00000552568 MYL6B-011 protein_coding Homo_sapiens 0 248
ENST00000553066 MYL6B-003 protein_coding Homo_sapiens 0 324
ENST00000570772 MYL4-008 nonsense_mediated_decay Homo_sapiens 0 204
ENST00000571981 MYL4-007 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000572303 MYL4-005 protein_coding Homo_sapiens 4e-39 165
ENST00000572316 MYL4-002 protein_coding Homo_sapiens 0 252
ENST00000573747 MYL4-009 nonsense_mediated_decay Homo_sapiens 3e-16 90
ENST00000576874 MYL4-003 protein_coding Homo_sapiens 0 228

Loading