C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 6820431F20 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153748 6820431F20Rik-001 ENSMUSG00000071796 10090 - 8:20268286-20297432 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000153748
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000153748 5.606±2.51 1.823±0.55 4.263±0.51 13.817±13.78 5.229±0.72 2.350±0.47 1.758±0.53 2.414±0.33 2.127±1.23 7.029±0.53 1.050±0.10 4.539±1.45 3.320±1.78 0.861±0.41

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268603 CDH11-001 protein_coding Homo_sapiens 0 691
ENST00000299345 CDH8-013 protein_coding Homo_sapiens 4.99997e-41 174
ENST00000394156 CDH11-002 protein_coding Homo_sapiens 0 691
ENST00000562325 CDH11-017 protein_coding Homo_sapiens 5e-24 115
ENST00000562712 CDH11-010 protein_coding Homo_sapiens 5e-24 115
ENST00000562882 CDH11-016 protein_coding Homo_sapiens 4e-24 115
ENST00000562998 CDH11-015 protein_coding Homo_sapiens 4e-24 115
ENST00000564317 CDH11-007 protein_coding Homo_sapiens 4e-24 115
ENST00000566827 CDH11-004 protein_coding Homo_sapiens 0 691
ENST00000567934 CDH11-003 protein_coding Homo_sapiens 0 499
ENST00000569128 CDH11-012 retained_intron Homo_sapiens 0 409
ENST00000569624 CDH11-018 processed_transcript Homo_sapiens 5e-24 115
ENST00000577390 CDH8-001 protein_coding Homo_sapiens 9.99995e-41 174
ENST00000577730 CDH8-012 protein_coding Homo_sapiens 9.99995e-41 174
ENST00000583382 CDH8-011 protein_coding Homo_sapiens 1.99993e-41 174
ENST00000584337 CDH8-003 protein_coding Homo_sapiens 4.99997e-41 174
ENST00000585315 CDH8-014 nonsense_mediated_decay Homo_sapiens 9.99995e-41 174

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