C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Vps20-associated 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154132 Vta1-001 ENSMUSG00000019868 10090 - 10:14654755-14705560 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000154132
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000154132 3.294±0.97 8.672±4.41 3.524±0.55 3.965±0.28 4.715±1.37 5.301±1.39 1.496±0.41 3.846±1.42 2.607±0.52 3.496±0.63 0.805±0.24 8.047±3.93 3.575±1.24 2.210±0.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005768 IEA endosome
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367621 VTA1-002 protein_coding Homo_sapiens 0 826
ENST00000367630 VTA1-001 protein_coding Homo_sapiens 0 1112
ENST00000452973 VTA1-201 protein_coding Homo_sapiens 0 640
ENST00000491881 VTA1-003 processed_transcript Homo_sapiens 0 459
ENST00000520205 VTA1P2-001 processed_pseudogene Homo_sapiens 0 453
ENST00000620996 VTA1-202 protein_coding Homo_sapiens 0 926

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