C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: small G protein signaling modulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154248 Sgsm1-010 ENSMUSG00000042216 10090 - 5:113266287-113310697 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENSMUST00000154248
Transcript ID Kidney
ENSMUST00000154248 0.343±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095C CIL_00095C_0002 VISTA 5:112851952-113454228

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000400358 SGSM1-001 protein_coding Homo_sapiens 0 1467
ENST00000400359 SGSM1-004 protein_coding Homo_sapiens 0 2287
ENST00000473458 SGSM1-002 retained_intron Homo_sapiens 0 1389
ENST00000480523 SGSM1-003 retained_intron Homo_sapiens 0 1389
ENST00000610372 SGSM1-201 protein_coding Homo_sapiens 0 2076

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