C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho family GTPase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154545 Rnd3-002 ENSMUSG00000017144 10090 - 2:51131835-51149110 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryENSMUST00000154545
Transcript ID Breast Ovary
ENSMUST00000154545 0.341±0.00 0.289±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DZ CIL_0007DZ_0002 CGP 2:50279881-51149111
CIL_0008JE CIL_0008JE_0002 VISTA 2:50669347-51272438

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263895 RND3-001 protein_coding Homo_sapiens 0 763
ENST00000375734 RND3-002 protein_coding Homo_sapiens 0 887
ENST00000409557 RND3-007 protein_coding Homo_sapiens 0 394
ENST00000439275 RND3-003 protein_coding Homo_sapiens 0 584
ENST00000454202 RND3-004 protein_coding Homo_sapiens 0 582
ENST00000466334 RND3-008 retained_intron Homo_sapiens 0 335
ENST00000472416 RND3-005 processed_transcript Homo_sapiens 0 451
ENST00000473639 RND3-009 retained_intron Homo_sapiens 8.40779e-45 183
ENST00000497865 RND3-006 retained_intron Homo_sapiens 0 468

Loading