C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family F (GCN20), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154660 Abcf3-005 ENSMUSG00000003234 10090 + 16:20550577-20558873 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungPlacentaTestisENSMUST00000154660
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Placenta Testis
ENSMUST00000154660 9.543±1.18 7.010±1.08 17.131±0.00 8.204±1.85 4.913±0.00 9.334±2.04 7.271±0.34 10.679±0.00 16.791±0.00 19.585±2.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G2 CIL_0005G2_0002 CGP 16:20535478-20561379
CIL_0005FP CIL_0005FP_0002 CGP 16:20548577-20605377

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292808 ABCF3-002 protein_coding Homo_sapiens 0 1046
ENST00000429586 ABCF3-001 protein_coding Homo_sapiens 0 1046
ENST00000466742 ABCF3-008 retained_intron Homo_sapiens 0 220
ENST00000468892 ABCF3-007 retained_intron Homo_sapiens 0 484
ENST00000471226 ABCF3-016 retained_intron Homo_sapiens 0 335
ENST00000472608 ABCF3-020 retained_intron Homo_sapiens 0 769
ENST00000473311 ABCF3-003 retained_intron Homo_sapiens 0 1014
ENST00000475728 ABCF3-019 retained_intron Homo_sapiens 0 276
ENST00000480562 ABCF3-009 retained_intron Homo_sapiens 0 220
ENST00000489719 ABCF3-017 retained_intron Homo_sapiens 0 302

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