C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-actin crosslinking factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154824 Macf1-002 ENSMUSG00000028649 10090 - 4:123349716-123372367 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000154824
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000154824 23.469±4.62 20.330±5.55 14.143±2.32 46.138±11.95 35.400±15.86 14.483±2.25 16.244±2.65 11.862±1.35 5.035±2.02 95.476±12.62 4.739±1.05 29.351±8.94 10.866±1.11 5.784±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000990 CIL_000990_0002 VISTA 4:123304867-123907516
CIL_0001ZU CIL_0001ZU_0002 CGP 4:123349633-123718202

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001707 IMP mesoderm formation
GO:0003779 IDA actin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0006620 IMP posttranslational protein targeting to membrane
GO:0006928 IMP cellular component movement
GO:0007050 IEA cell cycle arrest
GO:0007163 IMP establishment or maintenance of cell polarity
GO:0008017 IDA microtubule binding
GO:0015629 IDA actin cytoskeleton
GO:0015630 IDA microtubule cytoskeleton
GO:0016055 IGI Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000054274 macf1-201 protein_coding Danio_rerio 0 494
ENSDART00000146394 macf1-001 protein_coding Danio_rerio 0 494
ENST00000289893 MACF1-005 protein_coding Homo_sapiens 0 3297
ENST00000360115 MACF1-010 protein_coding Homo_sapiens 0 3382
ENST00000361689 MACF1-001 protein_coding Homo_sapiens 0 3186
ENST00000372915 MACF1-028 protein_coding Homo_sapiens 0 3179
ENST00000372925 MACF1-003 protein_coding Homo_sapiens 0 3186
ENST00000422234 MACF1-024 protein_coding Homo_sapiens 0 274
ENST00000442046 MACF1-007 protein_coding Homo_sapiens 0 1725
ENST00000446276 MACF1-011 protein_coding Homo_sapiens 0 1725
ENST00000462103 MACF1-026 processed_transcript Homo_sapiens 0 270
ENST00000462496 MACF1-023 processed_transcript Homo_sapiens 0 497
ENST00000496360 MACF1-006 processed_transcript Homo_sapiens 0 937
ENST00000497807 MACF1-008 processed_transcript Homo_sapiens 0 1592
ENST00000497964 MACF1-009 processed_transcript Homo_sapiens 0 693
ENST00000564288 MACF1-032 protein_coding Homo_sapiens 0 1725
ENST00000567887 MACF1-031 protein_coding Homo_sapiens 0 1725

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