C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | alpha thalassemia/mental retardation syndrome X-linked homolog (human) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000154866  |
Atrx-018 |
ENSMUSG00000031229 |
10090 | - |
X:105877441-105929315  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001YN | CIL_0001YN_0002 | CGP | X:105764279-105929397 |
| CIL_0001YT | CIL_0001YT_0002 | CGP | X:105797615-106011906 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000228 | IDA | nuclear chromosome |
| GO:0000792 | IDA | heterochromatin |
| GO:0003682 | IDA | chromatin binding |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0007283 | IMP | spermatogenesis |
| GO:0030900 | IMP | forebrain development |
| GO:0045944 | IGI | positive regulation of transcription from RNA polymerase II promoter |
| GO:0060009 | IMP | Sertoli cell development |
| GO:0072520 | IMP | seminiferous tubule development |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000373344
|
ATRX-001 | protein_coding | Homo_sapiens | 0 | 878 |
|
ENST00000395603
|
ATRX-002 | protein_coding | Homo_sapiens | 0 | 440 |
|
ENST00000480283
|
ATRX-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 455 |
|
ENST00000623321
|
ATRX-009 | protein_coding | Homo_sapiens | 0 | 937 |
|
ENST00000624032
|
ATRX-004 | protein_coding | Homo_sapiens | 0 | 878 |
|
ENST00000624166
|
ATRX-010 | protein_coding | Homo_sapiens | 0 | 440 |
|
ENST00000624668
|
ATRX-013 | protein_coding | Homo_sapiens | 0 | 322 |
|
ENST00000625063
|
ATRX-015 | protein_coding | Homo_sapiens | 0 | 809 |
