C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin filament associated protein 1-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154876 Afap1l1-003 ENSMUSG00000033032 10090 - 18:61730261-61786611 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyOvaryPlacentaTestisENSMUST00000154876
Transcript ID Breast Kidney Ovary Placenta Testis
ENSMUST00000154876 1.389±0.00 1.745±0.00 2.666±0.49 16.271±11.38 0.857±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000851 CIL_000851_0002 VISTA 18:61337492-61938739
CIL_0007ZC CIL_0007ZC_0002 VISTA 18:61351102-61954077
CIL_0001B2 CIL_0001B2_0002 CGP 18:61712440-61786702
CIL_0001F8 CIL_0001F8_0002 CGP 18:61730261-61911852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296721 AFAP1L1-001 protein_coding Homo_sapiens 0 1642
ENST00000455574 AFAP1L1-003 retained_intron Homo_sapiens 0 202
ENST00000513665 AFAP1L1-004 retained_intron Homo_sapiens 0 1445
ENST00000515000 AFAP1L1-002 protein_coding Homo_sapiens 0 1463

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