C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein phosphatase 1, regulatory subunit 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155163 Ppp1r42-003 ENSMUSG00000025916 10090 - 1:9995063-10009130 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleTestisENSMUST00000155163
Transcript ID Brain Muscle Testis
ENSMUST00000155163 0.076±0.00 0.079±0.00 13.102±2.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BD CIL_0003BD_0002 CGP 1:9960163-10009136
CIL_0003BC CIL_0003BC_0002 CGP 1:9968624-10038168

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324682 PPP1R42-001 protein_coding Homo_sapiens 0 706
ENST00000517834 PPP1R42-013 processed_transcript Homo_sapiens 0 191
ENST00000518588 PPP1R42-007 processed_transcript Homo_sapiens 3e-40 169
ENST00000519919 PPP1R42-004 processed_transcript Homo_sapiens 0 381
ENST00000520633 PPP1R42-003 processed_transcript Homo_sapiens 0 296
ENST00000521040 PPP1R42-005 processed_transcript Homo_sapiens 0 435
ENST00000522909 PPP1R42-011 protein_coding Homo_sapiens 0 704

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