C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transformed mouse 3T3 cell double minute 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155285 Mdm2-003 ENSMUSG00000020184 10090 - 10:117688895-117710022 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000155285
Transcript ID Ovary
ENSMUST00000155285 2.715±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0002039 IPI p53 binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0007089 IDA traversing start control point of mitotic cell cycle
GO:0016567 IDA protein ubiquitination
GO:0030163 IDA protein catabolic process
GO:0043066 IEA negative regulation of apoptotic process
GO:0045787 IGI positive regulation of cell cycle
GO:0071157 IEA negative regulation of cell cycle arrest

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258148 MDM2-003 protein_coding Homo_sapiens 0 394
ENST00000258149 MDM2-001 protein_coding Homo_sapiens 0 405
ENST00000299252 MDM2-006 protein_coding Homo_sapiens 0 211
ENST00000311420 MDM2-010 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000348801 MDM2-009 protein_coding Homo_sapiens 0.000000000000005 86
ENST00000350057 MDM2-033 protein_coding Homo_sapiens 3e-24 117
ENST00000356290 MDM2-201 protein_coding Homo_sapiens 0 222
ENST00000360430 MDM2-008 protein_coding Homo_sapiens 3e-23 113
ENST00000393410 MDM2-004 protein_coding Homo_sapiens 0 211
ENST00000393412 MDM2-202 protein_coding Homo_sapiens 0 219
ENST00000393413 MDM2-032 protein_coding Homo_sapiens 2e-23 113
ENST00000393415 MDM2-022 protein_coding Homo_sapiens 0 409
ENST00000393416 MDM2-013 protein_coding Homo_sapiens 0 224
ENST00000393417 MDM2-002 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000428863 MDM2-203 protein_coding Homo_sapiens 0 405
ENST00000462284 MDM2-204 protein_coding Homo_sapiens 1e-25 124
ENST00000478070 MDM2-011 protein_coding Homo_sapiens 0.000000000000004 86
ENST00000481186 MDM2-007 nonsense_mediated_decay Homo_sapiens 1e-22 111
ENST00000493419 MDM2-015 retained_intron Homo_sapiens 0 363
ENST00000496959 MDM2-005 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000517852 MDM2-019 protein_coding Homo_sapiens 0 211
ENST00000523991 MDM2-016 protein_coding Homo_sapiens 0 222
ENST00000536089 MDM2-031 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000537182 MDM2-030 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000539479 MDM2-012 protein_coding Homo_sapiens 0 409
ENST00000540352 MDM2-028 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000542502 MDM2-029 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000543323 MDM2-023 protein_coding Homo_sapiens 0 222
ENST00000544561 MDM2-026 protein_coding Homo_sapiens 0 244
ENST00000545204 MDM2-024 protein_coding Homo_sapiens 7e-26 121
ENST00000546048 MDM2-027 nonsense_mediated_decay Homo_sapiens 0 211

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