C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155422 Slc38a11-002 ENSMUSG00000061171 10090 - 2:65349474-65364034 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverMuscleOvaryPlacentaTestisENSMUST00000155422
Transcript ID Adrenal Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000155422 1.338±0.00 0.103±0.00 0.007±0.01 0.014±0.00 0.280±0.00 0.013±0.00 0.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CM CIL_0006CM_0002 CGP 2:65088339-65364034
CIL_0006CP CIL_0006CP_0002 CGP 2:65316430-65567627

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303735 SLC38A11-001 protein_coding Homo_sapiens 0 237
ENST00000409058 SLC38A11-002 protein_coding Homo_sapiens 0 243
ENST00000409149 SLC38A11-003 protein_coding Homo_sapiens 0 337
ENST00000409662 SLC38A11-009 protein_coding Homo_sapiens 0 337
ENST00000465342 POU5F1B-001 protein_coding Homo_sapiens 0.0002 53
ENST00000492134 SLC38A11-004 retained_intron Homo_sapiens 0 337

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