C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 20, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155559 Fam20a-004 ENSMUSG00000020614 10090 - 11:109669749-109722279 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverMuscleOvaryENSMUST00000155559
Transcript ID Adrenal Brain Colon Heart Kidney Liver Muscle Ovary
ENSMUST00000155559 0.399±0.00 0.195±0.00 0.325±0.00 0.273±0.00 0.398±0.03 0.223±0.00 0.270±0.00 0.917±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AG CIL_0003AG_0003 CGP 11:109649405-109722279

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005623 IDA cell
GO:0005794 IDA Golgi apparatus
GO:0070166 IMP enamel mineralization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000226094 FAM20A-003 processed_transcript Homo_sapiens 0 854
ENST00000590074 FAM20A-002 nonsense_mediated_decay Homo_sapiens 0 1310
ENST00000590873 FAM20A-005 nonsense_mediated_decay Homo_sapiens 0.00000000004 73
ENST00000592554 FAM20A-001 protein_coding Homo_sapiens 0 1731
ENST00000592847 FAM20A-004 processed_transcript Homo_sapiens 0 880

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