C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon regulatory factor 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155744 Irf7-004 ENSMUSG00000025498 10090 - 7:141263187-141266422 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000155744
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000155744 10.204±1.21 19.076±5.25 5.060±0.00 15.091±5.04 29.183±5.46 4.412±1.66 8.485±0.85 11.404±6.41 8.231±1.79 10.844±2.14 32.914±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006S8 CIL_0006S8_0003 CGP 7:141215860-141262750
CIL_0006RQ CIL_0006RQ_0003 CGP 7:141228784-141266481
CIL_0003OO CIL_0003OO_0002 CGP 7:141262706-141276786

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330243 IRF7-001 protein_coding Homo_sapiens 0 435
ENST00000348655 IRF7-005 protein_coding Homo_sapiens 0 435
ENST00000397566 IRF7-201 protein_coding Homo_sapiens 0 435
ENST00000397570 IRF7-202 protein_coding Homo_sapiens 0 435
ENST00000397574 IRF7-002 protein_coding Homo_sapiens 0 435
ENST00000469048 IRF7-004 nonsense_mediated_decay Homo_sapiens 0 435
ENST00000525445 IRF7-006 protein_coding Homo_sapiens 0 435
ENST00000531912 IRF7-013 retained_intron Homo_sapiens 0 230
ENST00000532326 IRF7-012 nonsense_mediated_decay Homo_sapiens 0 435
ENST00000533182 IRF7-007 nonsense_mediated_decay Homo_sapiens 0 435
ENST00000612534 IRF7-203 protein_coding Homo_sapiens 0 435
ENST00000617397 IRF7-204 protein_coding Homo_sapiens 0 435
ENST00000621391 IRF7-205 protein_coding Homo_sapiens 0 435

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