C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Hedgehog-interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155850 Hhip-002 ENSMUSG00000064325 10090 - 8:79966115-79990349 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartLiverMuscleOvaryPlacentaTestisENSMUST00000155850
Transcript ID Adipose Brain Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000155850 0.116±0.04 0.776±0.00 0.039±0.00 0.275±0.06 0.074±0.02 3.291±0.00 0.326±0.10 0.208±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YN CIL_0008YN_0002 VISTA 8:79537628-80138676
CIL_0007O9 CIL_0007O9_0002 UCNEbase 8:79748250-80315212
CIL_0008YM CIL_0008YM_0002 VISTA 8:79755435-80357135

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296575 HHIP-001 protein_coding Homo_sapiens 0 761
ENST00000503090 HHIP-005 processed_transcript Homo_sapiens 0 220
ENST00000512791 HHIP-006 retained_intron Homo_sapiens 1e-31 141

Loading