C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hedgehog interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000296575 HHIP-001 ENSG00000164161 9606 + 4:144646021-144745271 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296575
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296575 0.051±0.00 0.065±0.00 0.405±0.00 3.394±0.58 0.794±0.46 1.446±0.96 0.059±0.00 1.585±1.14 0.875±0.26 3.840±2.11 0.056±0.00 0.141±0.05 0.018±0.01 1.859±1.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YO CIL_0008YO_0001 VISTA 4:144055661-144657567
CIL_0008YM CIL_0008YM_0001 VISTA 4:144347096-144948803
CIL_0007O9 CIL_0007O9_0001 UCNEbase 4:144356342-145043587
CIL_0008YN CIL_0008YN_0001 VISTA 4:144638849-145240129

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IPI:IEA protein binding
GO:0005576 IEA extracellular region
GO:0005737 IEA cytoplasm
GO:0005887 ISS integral component of plasma membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0007165 IEA signal transduction
GO:0007224 IEA smoothened signaling pathway
GO:0007405 IEA neuroblast proliferation
GO:0008270 IDA zinc ion binding
GO:0009887 IEA organ morphogenesis
GO:0009953 IEA dorsal/ventral pattern formation
GO:0009968 IDA negative regulation of signal transduction
GO:0009986 IEA cell surface
GO:0016901 IEA oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor
GO:0040036 IEA regulation of fibroblast growth factor receptor signaling pathway
GO:0045879 ISS negative regulation of smoothened signaling pathway
GO:0048038 IEA quinone binding
GO:0048705 ISS skeletal system morphogenesis
GO:0055114 IEA oxidation-reduction process
GO:0060441 IEA epithelial tube branching involved in lung morphogenesis
GO:0097108 IPI hedgehog family protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079038 Hhip-001 protein_coding Mus_musculus 0 3397
ENSMUST00000155850 Hhip-002 processed_transcript Mus_musculus 0 761

Loading