C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor, alpha-induced protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156003 Tnfaip2-003 ENSMUSG00000021281 10090 + 12:111442662-111454678 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonLiverLungOvaryENSMUST00000156003
Transcript ID Adrenal Bladder Breast Colon Liver Lung Ovary
ENSMUST00000156003 1.709±0.59 7.699±1.80 1.632±0.00 0.884±0.18 3.933±2.13 2.055±0.13 1.747±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AG CIL_0009AG_0002 VISTA 12:110842738-111443613
CIL_0000OP CIL_0000OP_0002 CGP 12:111417430-111455018

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333007 TNFAIP2-201 protein_coding Homo_sapiens 0 852
ENST00000559255 TNFAIP2-005 protein_coding Homo_sapiens 0 481
ENST00000559406 TNFAIP2-003 nonsense_mediated_decay Homo_sapiens 0 643
ENST00000560428 TNFAIP2-008 retained_intron Homo_sapiens 8e-38 161
ENST00000560562 TNFAIP2-002 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000560670 TNFAIP2-004 protein_coding Homo_sapiens 0 643
ENST00000560869 TNFAIP2-001 protein_coding Homo_sapiens 0 859
ENST00000561156 TNFAIP2-009 nonsense_mediated_decay Homo_sapiens 0 307

Loading