C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: raftlin lipid raft linker 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156094 Rftn1-003 ENSMUSG00000039316 10090 - 17:50036623-50190497 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000156094
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000156094 7.950±1.66 15.462±1.89 1.065±0.24 1.617±0.30 30.404±16.55 5.628±2.25 9.149±2.44 4.203±1.20 0.896±0.31 14.929±6.67 1.652±0.37 14.729±9.34 0.911±0.52 0.640±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VC CIL_0002VC_0003 CGP 17:49992257-50293599

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334133 RFTN1-001 protein_coding Homo_sapiens 0 887
ENST00000432519 RFTN1-002 protein_coding Homo_sapiens 0 627
ENST00000483671 RFTN1-003 processed_transcript Homo_sapiens 0 377

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