C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002VC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070831-ENSDARG00000036214 CGP 7955 19:20783670-20886168
GeneTranscriptPositionBiotype
ENSDARG00000036214 (dazl)
deleted in azoospermia-like 		ENSDART00000052603 (dazl-004) 20871401-20885804 protein_coding
ENSDART00000136826 (dazl-003) 20881931-20885615 protein_coding
ENSDART00000137590 (dazl-001) 20871401-20885932 protein_coding
ENSDART00000147911 (dazl-002) 20872511-20886154 protein_coding
ENSDART00000151265 (dazl-005) 20872391-20886142 protein_coding
ENSDART00000151356 (dazl-006) 20872386-20886168 protein_coding
ENSDARG00000070831 (rftn1a)
raftlin, lipid raft linker 1a 		ENSDART00000104318 (rftn1a-201) 20791049-20850676 protein_coding
ENSDART00000132272 (rftn1a-001) 20783670-20870361 protein_coding
CIL_0002VC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131378-ENSG00000092345 CGP 9606 3:16313574-16670306
GeneTranscriptPositionBiotype
ENSG00000092345 (DAZL)
deleted in azoospermia-like 		ENST00000250863 (DAZL-002) 16586792-16604790 protein_coding
ENST00000399444 (DAZL-001) 16586792-16605499 protein_coding
ENST00000454457 (DAZL-004) 16596750-16670306 protein_coding
ENSG00000131378 (RFTN1)
raftlin, lipid raft linker 1 		ENST00000334133 (RFTN1-001) 16315856-16513706 protein_coding
ENST00000431547 (RFTN1-005) 16409473-16514026 protein_coding
ENST00000432519 (RFTN1-002) 16315845-16482865 protein_coding
ENST00000441460 (RFTN1-007) 16378095-16512922 protein_coding
ENST00000449415 (RFTN1-008) 16378095-16512904 protein_coding
ENST00000451036 (RFTN1-006) 16377719-16513374 protein_coding
ENST00000453536 (RFTN1-009) 16409428-16513522 nonsense_mediated_decay
ENST00000470458 (RFTN1-010) 16378072-16472599 processed_transcript
ENST00000483671 (RFTN1-003) 16316530-16370966 processed_transcript
ENST00000484752 (RFTN1-004) 16378053-16484835 processed_transcript
ENST00000495666 (RFTN1-011) 16377893-16434770 processed_transcript
ENST00000607320 (RFTN1-012) 16313574-16326867 nonsense_mediated_decay
ENSG00000154814 (OXNAD1)
oxidoreductase NAD-binding domain containing 1 		ENST00000285083 (OXNAD1-001) 16265199-16306087 protein_coding
ENST00000435829 (OXNAD1-006) 16265210-16337315 protein_coding
ENST00000442255 (OXNAD1-003) 16265207-16303983 nonsense_mediated_decay
ENST00000452581 (OXNAD1-002) 16265233-16301786 nonsense_mediated_decay
ENST00000486267 (OXNAD1-005) 16265232-16271195 retained_intron
ENST00000605932 (OXNAD1-007) 16265202-16337361 protein_coding
ENST00000606098 (OXNAD1-008) 16265466-16350299 protein_coding
ENST00000607329 (OXNAD1-009) 16347597-16349263 processed_transcript
ENSG00000233570 (LINC00690)
long intergenic non-protein coding RNA 690 		ENST00000429949 (LINC00690-001) 16536320-16541373 lincRNA
ENSG00000264034 (AC010139.1)
 ENST00000579736 (AC010139.1-201) 16619521-16619618 miRNA
ENSG00000269391 (RP11-194G10.3)
 ENST00000596963 (RP11-194G10.3-001) 16530771-16531802 lincRNA
ENSG00000271964 (RP11-415F23.2)
 ENST00000607464 (RP11-415F23.2-001) 16314439-16314987 antisense
ENSG00000272498 (RP11-415F23.3)
 ENST00000607363 (RP11-415F23.3-001) 16339308-16339871 antisense
ENSG00000272529 (RP11-415F23.4)
 ENST00000606713 (RP11-415F23.4-001) 16345126-16346440 antisense
CIL_0002VC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039316-ENSMUSG00000010592 CGP 10090 17:49992257-50293599
GeneTranscriptPositionBiotype
ENSMUSG00000010592 (Dazl)
deleted in azoospermia-like 		ENSMUST00000010736 (Dazl-201) 50279394-50293599 protein_coding
ENSMUSG00000039316 (Rftn1)
raftlin lipid raft linker 1 		ENSMUST00000044503 (Rftn1-001) 49992257-50190674 protein_coding
ENSMUST00000113195 (Rftn1-002) 49993260-50094332 protein_coding
ENSMUST00000156094 (Rftn1-003) 50036623-50190497 retained_intron
ENSMUSG00000067103 (AY702103)
cDNA sequence AY702103 		ENSMUST00000086914 (AY702103-201) 50239404-50241524 lincRNA
ENSMUST00000180996 (AY702103-001) 50239208-50246316 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VC_0001ENSDARG00000036214ENSDART00000052603ENSDART00000136826ENSDART00000137590ENSDART00000147911ENSDART00000151265ENSDART00000151356ENSDARG00000070831ENSDART00000104318ENSDART00000132272CIL_0002VC_0002ENSG00000092345ENST00000250863ENST00000399444ENST00000454457ENSG00000131378ENST00000334133ENST00000431547ENST00000432519ENST00000441460ENST00000449415ENST00000451036ENST00000453536ENST00000470458ENST00000483671ENST00000484752ENST00000495666ENST00000607320ENSG00000154814ENST00000285083ENST00000435829ENST00000442255ENST00000452581ENST00000486267ENST00000605932ENST00000606098ENST00000607329ENSG00000233570ENST00000429949ENSG00000264034ENST00000579736ENSG00000269391ENST00000596963ENSG00000271964ENST00000607464ENSG00000272498ENST00000607363ENSG00000272529ENST00000606713CIL_0002VC_0003ENSMUSG00000010592ENSMUST00000010736ENSMUSG00000039316ENSMUST00000044503ENSMUST00000113195ENSMUST00000156094ENSMUSG00000067103ENSMUST00000086914ENSMUST00000180996
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VC_0001ENSDARG00000036214ENSDART00000052603ENSDART00000137590ENSDART00000147911ENSDART00000151265ENSDART00000151356ENSDARG00000070831ENSDART00000104318ENSDART00000132272CIL_0002VC_0002ENSG00000092345ENST00000250863ENST00000399444ENST00000454457ENSG00000131378ENST00000334133ENST00000432519ENST00000451036ENST00000483671ENST00000495666ENSG00000154814ENST00000285083ENST00000435829ENST00000442255ENST00000452581ENST00000605932ENST00000606098ENSG00000233570ENST00000429949ENSG00000264034ENST00000579736ENSG00000269391ENST00000596963ENSG00000271964ENST00000607464ENSG00000272498ENST00000607363ENSG00000272529ENST00000606713CIL_0002VC_0003ENSMUSG00000010592ENSMUST00000010736ENSMUSG00000039316ENSMUST00000044503ENSMUST00000113195ENSMUST00000156094ENSMUSG00000067103ENSMUST00000086914ENSMUST00000180996
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036214 ENSDART00000052603 N/A N/A N/A 0.675±0.00 N/A N/A 0.108±0.00 7.997±1.25 0.102±0.00 N/A N/A N/A N/A N/A
ENSDART00000136826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137590 N/A N/A N/A N/A N/A N/A N/A 3.054±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000147911 N/A N/A N/A N/A N/A N/A 0.083±0.00 7.907±0.00 N/A N/A 0.095±0.00 N/A N/A N/A
ENSDART00000151265 N/A N/A N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A N/A N/A N/A N/A
ENSDART00000151356 N/A N/A N/A N/A N/A N/A 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000070831 ENSDART00000104318 N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A 0.072±0.00 N/A N/A N/A
ENSDART00000132272 N/A N/A N/A 1.271±0.33 N/A N/A 0.503±0.35 0.175±0.06 N/A N/A 0.068±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092345 ENST00000250863 0.005±0.00 0.004±0.00 N/A 0.009±0.00 N/A 0.005±0.00 N/A N/A N/A N/A N/A 0.008±0.01 0.037±0.03 N/A
ENST00000399444 0.005±0.00 0.010±0.00 N/A 0.009±0.00 N/A 0.024±0.00 N/A N/A N/A N/A N/A 0.019±0.02 0.010±0.00 29.914±4.47
ENST00000454457 N/A 0.022±0.00 N/A N/A 0.468±0.38 N/A N/A N/A N/A N/A N/A 0.067±0.00 0.028±0.00 88.790±0.00
ENSG00000131378 ENST00000334133 18.985±0.00 26.840±0.00 N/A 4.669±1.19 16.584±12.00 7.895±7.02 5.608±5.14 8.214±0.00 4.271±1.64 15.188±11.29 1.374±1.10 12.367±10.27 24.567±10.00 6.241±4.75
ENST00000431547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432519 N/A 4.587±0.00 N/A 0.979±0.00 4.513±3.15 N/A N/A 2.403±0.00 3.465±0.00 N/A 1.798±0.00 8.200±1.46 N/A N/A
ENST00000441460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.773±0.00 N/A N/A
ENST00000453536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.249±0.00 1.201±0.00 N/A N/A
ENST00000484752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.425±0.00 19.725±0.00 7.008±0.00
ENST00000607320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154814 ENST00000285083 N/A N/A 3.365±0.00 1.106±0.00 N/A 4.949±0.00 0.507±0.16 1.356±0.00 0.741±0.00 0.233±0.00 1.296±0.72 0.429±0.06 0.321±0.07 N/A
ENST00000435829 0.981±0.00 N/A N/A 1.697±0.00 2.273±0.00 N/A 0.798±0.06 4.282±1.09 N/A N/A N/A 1.779±0.00 0.905±0.00 3.017±0.80
ENST00000442255 0.483±0.00 N/A 0.853±0.00 N/A N/A 0.168±0.00 0.536±0.00 1.137±0.00 2.417±0.00 0.808±0.00 N/A 0.756±0.25 0.477±0.05 1.605±0.84
ENST00000452581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.130±0.00 N/A 0.643±0.00 N/A
ENST00000486267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605932 N/A 2.014±0.00 N/A N/A N/A 1.254±0.00 1.495±0.00 0.915±0.00 4.252±0.00 1.333±0.00 1.140±0.00 1.620±0.38 1.183±0.41 N/A
ENST00000606098 0.232±0.00 N/A N/A N/A N/A 1.315±0.00 0.416±0.00 N/A 0.872±0.00 N/A N/A N/A N/A N/A
ENST00000607329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233570 ENST00000429949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.452±0.98
ENSG00000264034 ENST00000579736 N/A 2.295±0.00 N/A 0.312±0.00 N/A N/A N/A 1.214±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000269391 ENST00000596963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.228±0.16
ENSG00000271964 ENST00000607464 0.337±0.00 3.080±0.00 0.353±0.00 0.845±0.30 1.465±0.00 1.457±1.21 0.433±0.18 0.718±0.42 0.225±0.09 1.880±1.57 1.317±0.00 0.316±0.13 0.182±0.02 0.243±0.19
ENSG00000272498 ENST00000607363 0.136±0.00 0.730±0.00 0.138±0.00 0.416±0.21 0.891±0.80 N/A 0.392±0.07 0.313±0.18 0.699±0.63 1.496±1.30 0.140±0.00 0.242±0.10 N/A 0.541±0.52
ENSG00000272529 ENST00000606713 0.186±0.00 1.858±0.00 N/A 0.143±0.00 N/A 1.179±0.00 0.185±0.00 0.448±0.00 0.067±0.00 0.555±0.00 N/A 0.462±0.05 0.069±0.00 0.746±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000010592 ENSMUST00000010736 0.020±0.01 0.059±0.00 0.010±0.00 0.211±0.16 0.076±0.01 0.063±0.02 0.060±0.03 0.036±0.02 0.018±0.01 0.038±0.00 0.132±0.03 3.242±1.95 0.082±0.05 26.671±10.70
ENSMUSG00000039316 ENSMUST00000044503 1.167±0.11 1.338±0.20 0.410±0.00 N/A 4.985±3.37 1.133±0.56 N/A 1.222±0.71 0.264±0.16 2.263±0.50 0.387±0.10 1.853±1.36 0.345±0.32 0.216±0.05
ENSMUST00000113195 8.210±0.81 N/A 1.297±0.30 2.067±0.17 8.916±1.99 2.216±0.32 10.805±2.19 2.510±0.83 1.249±0.67 5.995±0.42 3.074±0.41 5.353±1.01 1.162±0.96 0.880±0.21
ENSMUST00000156094 7.950±1.66 15.462±1.89 1.065±0.24 1.617±0.30 30.404±16.55 5.628±2.25 9.149±2.44 4.203±1.20 0.896±0.31 14.929±6.67 1.652±0.37 14.729±9.34 0.911±0.52 0.640±0.16
ENSMUSG00000067103 ENSMUST00000086914 N/A N/A N/A 0.005±0.00 N/A N/A N/A N/A N/A N/A N/A 0.069±0.02 N/A 12.647±1.53
ENSMUST00000180996 N/A N/A N/A 0.001±0.00 N/A N/A 0.007±0.00 N/A N/A N/A N/A 0.068±0.04 0.002±0.00 3.147±0.12

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