C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secretion regulating guanine nucleotide exchange factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156147 Sergef-006 ENSMUSG00000030839 10090 - 7:46443221-46603242 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENSMUST00000156147
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENSMUST00000156147 4.294±0.40 9.277±0.00 2.612±1.29 1.858±0.70 0.840±0.00 3.500±0.83 1.486±0.60 0.541±0.00 3.699±1.01 4.516±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000418 CIL_000418_0003 CGP 7:46396497-46639807
CIL_0001IE CIL_0001IE_0003 CGP 7:46443168-46672537

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265965 SERGEF-001 protein_coding Homo_sapiens 0 350
ENST00000524589 SERGEF-020 processed_transcript Homo_sapiens 0 193
ENST00000525168 SERGEF-023 processed_transcript Homo_sapiens 9e-34 147
ENST00000525422 SERGEF-002 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000525920 SERGEF-014 protein_coding Homo_sapiens 4e-34 148
ENST00000527494 SERGEF-011 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000528200 SERGEF-003 protein_coding Homo_sapiens 0 219
ENST00000528369 SERGEF-017 processed_transcript Homo_sapiens 0 222
ENST00000529151 SERGEF-015 protein_coding Homo_sapiens 0 326
ENST00000529440 SERGEF-019 processed_transcript Homo_sapiens 0 219
ENST00000529728 SERGEF-004 protein_coding Homo_sapiens 2e-30 137
ENST00000531299 SERGEF-022 processed_transcript Homo_sapiens 0 193
ENST00000531926 SERGEF-021 processed_transcript Homo_sapiens 0 193
ENST00000532546 SERGEF-018 nonsense_mediated_decay Homo_sapiens 3e-32 143
ENST00000533241 SERGEF-016 protein_coding Homo_sapiens 8.99998e-41 171

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