C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TRAF type zinc finger domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156158 Trafd1-003 ENSMUSG00000042726 10090 - 5:121371725-121378823 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000156158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000156158 10.681±1.83 6.436±1.08 6.881±1.44 12.831±8.70 8.535±2.73 4.678±0.67 3.781±0.92 2.543±0.94 3.519±0.96 9.693±3.38 1.287±0.10 7.056±2.22 2.527±1.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257604 TRAFD1-201 protein_coding Homo_sapiens 0 315
ENST00000412615 TRAFD1-001 protein_coding Homo_sapiens 0 315
ENST00000552890 TRAFD1-003 nonsense_mediated_decay Homo_sapiens 0 279

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