C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, subunit beta 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156375 Gabrb3-003 ENSMUSG00000033676 10090 + 7:57591162-57765781 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverLungOvaryENSMUST00000156375
Transcript ID Adipose Adrenal Colon Kidney Liver Lung Ovary
ENSMUST00000156375 0.653±0.00 1.620±0.29 0.220±0.05 1.553±0.00 0.136±0.00 0.057±0.01 0.427±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LH CIL_0006LH_0002 CGP 7:57407690-57828802
CIL_0007CV CIL_0007CV_0002 CGP 7:57590518-58829426

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299267 GABRB3-001 protein_coding Homo_sapiens 0 625
ENST00000311550 GABRB3-002 protein_coding Homo_sapiens 0 905
ENST00000400188 GABRB3-006 protein_coding Homo_sapiens 0 366
ENST00000541819 GABRB3-003 protein_coding Homo_sapiens 0 625
ENST00000545868 GABRB3-004 protein_coding Homo_sapiens 0 364
ENST00000554556 GABRB3-009 nonsense_mediated_decay Homo_sapiens 0 542
ENST00000554722 GABRB3-008 processed_transcript Homo_sapiens 0 263
ENST00000555094 GABRB3-011 protein_coding Homo_sapiens 0 366
ENST00000555632 GABRB3-012 nonsense_mediated_decay Homo_sapiens 0 475
ENST00000556166 GABRB3-005 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000556636 GABRB3-013 nonsense_mediated_decay Homo_sapiens 8e-36 154
ENST00000557641 GABRB3-010 processed_transcript Homo_sapiens 0 263
ENST00000622697 GABRB3-201 protein_coding Homo_sapiens 0 544

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