C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCCTC-binding factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156436 Ctcf-006 ENSMUSG00000005698 10090 + 8:105676011-105680617 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000156436
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000156436 21.647±0.00 51.008±0.00 31.885±20.80 7.514±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LR CIL_0003LR_0003 CGP 8:105605229-105682922
CIL_0006LW CIL_0006LW_0003 CGP 8:105636568-105698178

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264010 CTCF-001 protein_coding Homo_sapiens 0 505
ENST00000401394 CTCF-002 protein_coding Homo_sapiens 0 505

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