C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transducin-like enhancer of split 3, homolog of Drosophila E(spl)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159050 Tle3-007 ENSMUSG00000032280 10090 + 9:61373438-61416716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000159050
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000159050 8.989±0.96 19.675±5.10 10.402±1.54 12.460±3.10 8.112±2.21 1.417±0.12 5.098±1.10 1.393±0.33 7.019±2.17 0.577±0.00 12.744±1.57 25.419±2.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008V4 CIL_0008V4_0002 VISTA 9:61070058-61671069
CIL_0009BU CIL_0009BU_0002 VISTA 9:61300844-61903666

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000100632 gro2-202 protein_coding Danio_rerio 0 1349
ENSDART00000100633 gro2-203 protein_coding Danio_rerio 0 366
ENSDART00000025018 gro2-201 protein_coding Danio_rerio 0 366
ENSDART00000045679 gro2-001 protein_coding Danio_rerio 0 366
ENST00000317509 TLE3-004 protein_coding Homo_sapiens 0 1607
ENST00000376472 TLE1-201 protein_coding Homo_sapiens 0 1053
ENST00000376499 TLE1-001 protein_coding Homo_sapiens 0 1061
ENST00000440567 TLE3-010 protein_coding Homo_sapiens 0 2979
ENST00000451782 TLE3-030 protein_coding Homo_sapiens 0 3016
ENST00000539550 TLE3-022 protein_coding Homo_sapiens 0 1677
ENST00000542329 TLE3-028 retained_intron Homo_sapiens 0 797
ENST00000557815 TLE3-023 retained_intron Homo_sapiens 0 351
ENST00000557907 TLE3-015 protein_coding Homo_sapiens 0 3085
ENST00000557919 TLE3-017 nonsense_mediated_decay Homo_sapiens 0 3077
ENST00000557984 TLE3-026 protein_coding Homo_sapiens 0 399
ENST00000557997 TLE3-016 protein_coding Homo_sapiens 0 3085
ENST00000558201 TLE3-011 protein_coding Homo_sapiens 0 3038
ENST00000558379 TLE3-008 protein_coding Homo_sapiens 0 3144
ENST00000558939 TLE3-001 protein_coding Homo_sapiens 0 3073
ENST00000559048 TLE3-007 protein_coding Homo_sapiens 0 3094
ENST00000559191 TLE3-009 protein_coding Homo_sapiens 0 1517
ENST00000559608 TLE3-029 retained_intron Homo_sapiens 0 291
ENST00000559826 TLE3-005 retained_intron Homo_sapiens 0 401
ENST00000559929 TLE3-013 protein_coding Homo_sapiens 0 2492
ENST00000560525 TLE3-019 nonsense_mediated_decay Homo_sapiens 0 2983
ENST00000560589 TLE3-012 protein_coding Homo_sapiens 0 2876
ENST00000560939 TLE3-020 protein_coding Homo_sapiens 0 2966
ENST00000560996 TLE3-014 protein_coding Homo_sapiens 0 545
ENST00000561453 TLE3-002 nonsense_mediated_decay Homo_sapiens 0 3136

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