C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: amyotrophic lateral sclerosis 2 (juvenile)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159166 Als2-003 ENSMUSG00000026024 10090 - 1:59191609-59237231 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000159166
Transcript ID Ovary
ENSMUST00000159166 1.350±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0002 VISTA 1:58652904-59256413
CIL_0009CR CIL_0009CR_0002 VISTA 1:59040862-59642046
CIL_00020O CIL_00020O_0002 CGP 1:59100590-59163389
CIL_0000JK CIL_0000JK_0003 CGP 1:59120935-59237231
CIL_0000JL CIL_0000JL_0003 CGP 1:59162926-59352993

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264276 ALS2-001 protein_coding Homo_sapiens 0 2726
ENST00000409632 ALS2-009 protein_coding Homo_sapiens 0 575
ENST00000410052 ALS2-006 protein_coding Homo_sapiens 0 472
ENST00000439495 ALS2-005 nonsense_mediated_decay Homo_sapiens 0 649
ENST00000467448 ALS2-002 protein_coding Homo_sapiens 0 1046
ENST00000482789 ALS2-003 retained_intron Homo_sapiens 0 2392
ENST00000482891 ALS2-004 retained_intron Homo_sapiens 0 2726
ENST00000483703 ALS2-010 processed_transcript Homo_sapiens 0 237
ENST00000494017 ALS2-011 processed_transcript Homo_sapiens 0 237
ENST00000496244 ALS2-007 processed_transcript Homo_sapiens 0 462

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