| Transcript ID | Liver |
|---|---|
| ENSMUST00000159194 | 0.228±0.03 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | HD domain containing 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000159194  |
Hddc2-005 |
ENSMUSG00000000295 |
10090 | + |
10:31313472-31328184  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008OH | CIL_0008OH_0002 | VISTA | 10:30727819-31328728 |
| CIL_0008OI | CIL_0008OI_0002 | VISTA | 10:30734051-31335579 |
| CIL_0008OD | CIL_0008OD_0002 | VISTA | 10:30753081-31354088 |
| CIL_0008OC | CIL_0008OC_0002 | VISTA | 10:30928891-31529864 |
| CIL_0008OJ | CIL_0008OJ_0002 | VISTA | 10:30972653-31573675 |
| CIL_000666 | CIL_000666_0002 | CGP | 10:31313382-31445921 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005739 | IDA | mitochondrion |
| GO:0008150 | ND | biological_process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000318787
|
HDDC2-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 235 |
|
ENST00000398153
|
HDDC2-002 | protein_coding | Homo_sapiens | 0 | 412 |
|
ENST00000608284
|
HDDC2-005 | protein_coding | Homo_sapiens | 0 | 322 |
|
ENST00000608295
|
HDDC2-004 | protein_coding | Homo_sapiens | 0 | 324 |
|
ENST00000608461
|
HDDC2-007 | retained_intron | Homo_sapiens | 1.99965e-42 | 176 |
|
ENST00000609021
|
HDDC2-003 | retained_intron | Homo_sapiens | 0.00000000000002 | 86 |
|
ENST00000609477
|
HDDC2-009 | nonsense_mediated_decay | Homo_sapiens | 1.99965e-42 | 176 |
|
ENST00000609574
|
HDDC2-006 | processed_transcript | Homo_sapiens | 1.99965e-42 | 176 |
