C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HD domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318787 HDDC2-001 ENSG00000111906 9606 - 6:125275350-125301974 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLiverLungMuscleOvaryPlacentaENST00000318787
Transcript ID Bladder Brain Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000318787 2.176±0.00 7.862±0.00 1.973±0.00 2.066±0.00 3.869±0.00 4.435±0.00 4.514±0.00 4.934±0.00 3.330±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008OJ CIL_0008OJ_0001 VISTA 6:125040277-125641345
CIL_0008OC CIL_0008OC_0001 VISTA 6:125070031-125671092

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159659 Hddc2-004 retained_intron Mus_musculus 0 326
ENSMUST00000000304 Hddc2-001 protein_coding Mus_musculus 0 326
ENSMUST00000159194 Hddc2-005 nonsense_mediated_decay Mus_musculus 0 235
ENSMUST00000162076 Hddc2-003 retained_intron Mus_musculus 9.94922e-44 182
ENSMUST00000160447 Hddc2-002 retained_intron Mus_musculus 2e-36 158

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