C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thromboxane A synthase 1, platelet
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159226 Tbxas1-004 ENSMUSG00000029925 10090 + 6:38919005-39029153 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverTestisENSMUST00000159226
Transcript ID Liver Testis
ENSMUST00000159226 0.124±0.04 0.069±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030C CIL_00030C_0002 CGP 6:38663069-38876165
CIL_00023M CIL_00023M_0003 CGP 6:38694390-39084585
CIL_000309 CIL_000309_0003 CGP 6:38875404-39118349

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263552 TBXAS1-201 protein_coding Homo_sapiens 0 1061
ENST00000336425 TBXAS1-001 protein_coding Homo_sapiens 0 1061
ENST00000411653 TBXAS1-005 protein_coding Homo_sapiens 0 1061
ENST00000414041 TBXAS1-013 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000414508 TBXAS1-202 protein_coding Homo_sapiens 0 1061
ENST00000416849 TBXAS1-203 protein_coding Homo_sapiens 0 560
ENST00000422328 TBXAS1-006 nonsense_mediated_decay Homo_sapiens 0 789
ENST00000425687 TBXAS1-002 protein_coding Homo_sapiens 0 952
ENST00000438104 TBXAS1-011 protein_coding Homo_sapiens 0 507
ENST00000448866 TBXAS1-003 protein_coding Homo_sapiens 0 1061
ENST00000455353 TBXAS1-008 protein_coding Homo_sapiens 0 409
ENST00000458722 TBXAS1-004 protein_coding Homo_sapiens 0 560
ENST00000462275 TBXAS1-007 processed_transcript Homo_sapiens 0 791
ENST00000469630 TBXAS1-015 retained_intron Homo_sapiens 0 518
ENST00000476637 TBXAS1-014 retained_intron Homo_sapiens 0 274
ENST00000492560 TBXAS1-012 retained_intron Homo_sapiens 0 278

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