C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: thromboxane A synthase 1 (platelet)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422328 TBXAS1-006 ENSG00000059377 9606 + 7:139829247-140020291 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLungENST00000422328
Transcript ID Heart Lung
ENST00000422328 0.346±0.00 1.640±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030C CIL_00030C_0001 CGP 7:139523856-139777778
CIL_00023M CIL_00023M_0002 CGP 7:139561570-140020325
CIL_000309 CIL_000309_0002 CGP 7:139777051-140063721

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003017 Tbxas1-001 protein_coding Mus_musculus 0 1245
ENSMUST00000161781 Tbxas1-002 retained_intron Mus_musculus 0 1029
ENSMUST00000159226 Tbxas1-004 retained_intron Mus_musculus 0 789
ENSMUST00000161360 Tbxas1-005 retained_intron Mus_musculus 0 758
ENSMUST00000162521 Tbxas1-003 protein_coding Mus_musculus 0 272
ENSMUST00000160963 Tbxas1-006 protein_coding Mus_musculus 0 235
ENSMUST00000162656 Tbxas1-007 processed_transcript Mus_musculus 1e-30 139

Loading