C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF2 and NCK interacting kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159236 Tnik-001 ENSMUSG00000027692 10090 + 3:28263215-28675858 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000159236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000159236 0.184±0.08 0.256±0.05 1.126±0.63 1.072±0.00 0.692±0.21 0.325±0.09 1.169±0.00 0.053±0.03 0.067±0.05 0.614±0.31 0.659±0.00 0.257±0.07 0.083±0.02 0.354±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070U CIL_00070U_0002 CGP 3:27938695-28675858
CIL_0007SJ CIL_0007SJ_0002 VISTA 3:28120093-28722161
CIL_00080K CIL_00080K_0002 VISTA 3:28128875-28733466
CIL_0008FL CIL_0008FL_0002 VISTA 3:28138282-28741962
CIL_000710 CIL_000710_0002 CGP 3:28263214-28728356

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 ISS protein serine/threonine kinase activity
GO:0005083 IEA small GTPase regulator activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0005856 ISS cytoskeleton
GO:0006468 ISS protein phosphorylation
GO:0007256 ISS activation of JNKK activity
GO:0016055 IEA Wnt signaling pathway
GO:0031532 ISS actin cytoskeleton reorganization
GO:0035556 ISS intracellular signal transduction
GO:0046777 ISS protein autophosphorylation
GO:0048471 ISO perinuclear region of cytoplasm
GO:0048814 ISS regulation of dendrite morphogenesis
GO:0055037 ISO recycling endosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284483 TNIK-004 protein_coding Homo_sapiens 0 3542
ENST00000341852 TNIK-003 protein_coding Homo_sapiens 0 3446
ENST00000357327 TNIK-006 protein_coding Homo_sapiens 0 5258
ENST00000436636 TNIK-001 protein_coding Homo_sapiens 0 3952
ENST00000459881 TNIK-017 retained_intron Homo_sapiens 0 568
ENST00000460047 TNIK-007 protein_coding Homo_sapiens 0 3062
ENST00000464785 TNIK-016 processed_transcript Homo_sapiens 0 414
ENST00000465393 TNIK-002 protein_coding Homo_sapiens 0 597
ENST00000468757 TNIK-012 protein_coding Homo_sapiens 0 1323
ENST00000470834 TNIK-009 protein_coding Homo_sapiens 0 5363
ENST00000475336 TNIK-005 protein_coding Homo_sapiens 0 3062
ENST00000484051 TNIK-011 retained_intron Homo_sapiens 0 917
ENST00000487846 TNIK-015 retained_intron Homo_sapiens 0 573
ENST00000488470 TNIK-008 protein_coding Homo_sapiens 0 2957
ENST00000496492 TNIK-010 retained_intron Homo_sapiens 0 2782

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