C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NEDD8 activating enzyme E1 subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159393 Nae1-002 ENSMUSG00000031878 10090 - 8:104522905-104534588 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000159393
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000159393 0.675±0.24 0.371±0.17 2.228±0.57 2.438±0.00 0.442±0.02 0.420±0.03 0.380±0.00 0.603±0.32 0.997±0.21 0.939±0.56 0.988±0.00 1.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0002 VISTA 8:104309522-104912018
CIL_0004IV CIL_0004IV_0002 CGP 8:104446719-104534637
CIL_0003LY CIL_0003LY_0003 CGP 8:104511028-104550343

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290810 NAE1-001 protein_coding Homo_sapiens 0 676
ENST00000359087 NAE1-002 protein_coding Homo_sapiens 0 676
ENST00000379463 NAE1-005 protein_coding Homo_sapiens 0 676
ENST00000394074 NAE1-004 protein_coding Homo_sapiens 0 676
ENST00000561579 NAE1-010 protein_coding Homo_sapiens 0 599
ENST00000562757 NAE1-016 retained_intron Homo_sapiens 0 326
ENST00000563185 NAE1-014 protein_coding Homo_sapiens 0 422
ENST00000563253 NAE1-013 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000563419 NAE1-006 retained_intron Homo_sapiens 0 326
ENST00000564040 NAE1-022 processed_transcript Homo_sapiens 0 326
ENST00000565535 NAE1-021 protein_coding Homo_sapiens 0 248
ENST00000566336 NAE1-020 protein_coding Homo_sapiens 0 396
ENST00000567743 NAE1-003 nonsense_mediated_decay Homo_sapiens 0 695
ENST00000569348 NAE1-019 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000569388 NAE1-015 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000569963 NAE1-012 retained_intron Homo_sapiens 0 337

Loading