C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00002S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076484-ENSDARG00000043077 CGP 7955 22:10391570-10507830
GeneTranscriptPositionBiotype
ENSDARG00000076484 (stab1)
stabilin 1
ENSDART00000092050 (stab1-001) 10391570-10464531 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00002S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042286-ENSMUSG00000021910 CGP 10090 14:31139013-31216946
GeneTranscriptPositionBiotype
ENSMUSG00000021910 (Nisch)
nischarin
ENSMUST00000022469 (Nisch-004) 31170930-31206801 protein_coding
ENSMUST00000163552 (Nisch-016) 31174427-31176588 protein_coding
ENSMUST00000163846 (Nisch-014) 31177699-31185642 processed_transcript
ENSMUST00000164000 (Nisch-023) 31183513-31184949 processed_transcript
ENSMUST00000164617 (Nisch-008) 31200944-31206700 processed_transcript
ENSMUST00000164956 (Nisch-009) 31177501-31192619 processed_transcript
ENSMUST00000164989 (Nisch-006) 31185726-31206700 nonsense_mediated_decay
ENSMUST00000165981 (Nisch-002) 31185690-31206700 protein_coding
ENSMUST00000167223 (Nisch-019) 31180850-31182829 processed_transcript
ENSMUST00000167449 (Nisch-024) 31172014-31173728 protein_coding
ENSMUST00000167602 (Nisch-018) 31203306-31216946 processed_transcript
ENSMUST00000167979 (Nisch-012) 31186364-31187452 processed_transcript
ENSMUST00000168206 (Nisch-005) 31170930-31191530 protein_coding
ENSMUST00000168451 (Nisch-020) 31176896-31203390 protein_coding
ENSMUST00000169149 (Nisch-021) 31187113-31203311 nonsense_mediated_decay
ENSMUST00000169628 (Nisch-017) 31171366-31174282 protein_coding
ENSMUST00000169906 (Nisch-022) 31177206-31181470 protein_coding
ENSMUST00000170253 (Nisch-013) 31171258-31187207 protein_coding
ENSMUST00000170343 (Nisch-010) 31185011-31191497 protein_coding
ENSMUST00000170436 (Nisch-015) 31177392-31185322 nonsense_mediated_decay
ENSMUST00000171735 (Nisch-007) 31201866-31206701 protein_coding
ENSMUST00000172142 (Nisch-001) 31183313-31206826 protein_coding
ENSMUST00000172370 (Nisch-011) 31188340-31191089 retained_intron
ENSMUSG00000042286 (Stab1)
stabilin 1
ENSMUST00000036618 (Stab1-001) 31139013-31168641 protein_coding
ENSMUST00000159208 (Stab1-009) 31139017-31140174 processed_transcript
ENSMUST00000159249 (Stab1-008) 31141633-31143192 protein_coding
ENSMUST00000159480 (Stab1-007) 31139013-31140866 retained_intron
ENSMUST00000159532 (Stab1-002) 31158510-31168595 retained_intron
ENSMUST00000159757 (Stab1-003) 31156637-31161829 retained_intron
ENSMUST00000160024 (Stab1-013) 31139013-31139848 protein_coding
ENSMUST00000160720 (Stab1-005) 31139019-31143725 retained_intron
ENSMUST00000161129 (Stab1-004) 31139017-31145453 retained_intron
ENSMUST00000161464 (Stab1-010) 31156637-31157384 retained_intron
ENSMUST00000161631 (Stab1-012) 31139969-31140943 retained_intron
ENSMUST00000162169 (Stab1-006) 31139013-31142832 retained_intron
ENSMUST00000162763 (Stab1-011) 31142384-31142997 retained_intron
ENSMUSG00000071547 (Nt5dc2)
5'-nucleotidase domain containing 2
ENSMUST00000090212 (Nt5dc2-201) 31134853-31139121 protein_coding
ENSMUSG00000091898 (Tnnc1)
troponin C, cardiac/slow skeletal
ENSMUST00000161399 (Tnnc1-002) 31208332-31210998 retained_intron
ENSMUST00000169169 (Tnnc1-001) 31208312-31211729 protein_coding
ENSMUST00000170268 (Tnnc1-003) 31208330-31211636 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002S_0001ENSDARG00000076484ENSDART00000092050CIL_00002S_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002S_0001ENSDARG00000076484ENSDART00000092050CIL_00002S_0002ENSMUSG00000021910ENSMUST00000022469ENSMUST00000165981ENSMUST00000168206ENSMUST00000169906ENSMUST00000170436ENSMUST00000172142ENSMUSG00000042286ENSMUST00000036618ENSMUST00000159480ENSMUST00000161129ENSMUSG00000071547ENSMUST00000090212ENSMUSG00000091898ENSMUST00000161399ENSMUST00000169169ENSMUST00000170268
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000076484 ENSDART00000092050 N/A N/A N/A 0.657±0.51 N/A N/A 5.524±0.00 9.470±0.00 0.188±0.00 N/A 1.492±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021910 ENSMUST00000022469 N/A 22.828±4.99 N/A 31.331±9.33 N/A N/A 7.059±0.87 9.786±0.66 8.012±3.24 N/A 4.699±0.88 N/A 8.108±1.60 2.176±1.32
ENSMUST00000163552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165981 N/A N/A N/A N/A 44.974±0.00 N/A N/A N/A N/A N/A N/A 27.867±4.75 9.715±2.77 N/A
ENSMUST00000167223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168206 52.799±9.44 39.673±13.78 63.347±21.33 70.284±1.76 27.541±3.88 27.962±4.18 21.412±1.19 31.534±6.68 21.021±9.99 56.137±15.96 7.247±1.60 46.575±11.55 41.389±11.68 7.833±0.75
ENSMUST00000168451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.329±0.00
ENSMUST00000170253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.953±0.00
ENSMUST00000171735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172142 N/A N/A N/A 28.275±0.00 N/A N/A N/A N/A 16.101±2.97 N/A 3.606±0.00 32.414±0.00 12.839±3.11 1.613±0.00
ENSMUST00000172370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042286 ENSMUST00000036618 22.681±0.62 15.874±1.80 11.675±1.40 4.154±0.74 18.950±4.74 12.866±0.71 9.070±0.93 6.416±0.37 5.883±1.15 21.569±3.47 1.326±0.37 25.206±8.19 3.961±1.11 1.235±0.07
ENSMUST00000159208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.533±0.63 N/A N/A N/A
ENSMUST00000159532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161129 25.008±5.07 10.985±2.38 18.678±1.35 N/A 18.555±3.94 13.680±1.40 7.584±0.71 5.293±0.95 6.610±2.29 15.944±2.70 1.332±0.26 18.603±2.25 7.303±0.00 1.146±0.01
ENSMUST00000161464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000071547 ENSMUST00000090212 28.200±0.00 32.478±3.42 N/A 59.761±41.21 N/A N/A 16.523±0.40 14.995±3.28 85.219±19.61 41.679±18.70 N/A 58.532±18.40 38.614±22.15 3.837±1.48
ENSMUSG00000091898 ENSMUST00000161399 N/A N/A 0.618±0.07 N/A 0.363±0.00 N/A N/A 0.171±0.03 N/A N/A N/A 0.732±0.30 0.396±0.00 0.285±0.16
ENSMUST00000169169 0.192±0.08 0.289±0.17 1.031±0.02 6.277±6.01 1.519±0.05 0.423±0.09 2506.205±373.29 3.112±2.02 14.141±10.65 20.678±1.42 206.960±130.69 0.924±0.37 18.263±18.71 0.397±0.23
ENSMUST00000170268 N/A N/A N/A 4.767±0.00 N/A N/A N/A 0.161±0.00 0.169±0.05 N/A N/A 0.995±0.51 16.000±14.86 N/A

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