C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: HD domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159659 Hddc2-004 ENSMUSG00000000295 10090 + 10:31320167-31328202 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryTestisENSMUST00000159659
Transcript ID Liver Ovary Testis
ENSMUST00000159659 0.178±0.01 7.966±0.00 3.153±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008OH CIL_0008OH_0002 VISTA 10:30727819-31328728
CIL_0008OI CIL_0008OI_0002 VISTA 10:30734051-31335579
CIL_0008OD CIL_0008OD_0002 VISTA 10:30753081-31354088
CIL_0008OC CIL_0008OC_0002 VISTA 10:30928891-31529864
CIL_0008OJ CIL_0008OJ_0002 VISTA 10:30972653-31573675
CIL_000666 CIL_000666_0002 CGP 10:31313382-31445921

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318787 HDDC2-001 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000398153 HDDC2-002 protein_coding Homo_sapiens 0 327
ENST00000608295 HDDC2-004 protein_coding Homo_sapiens 0 239
ENST00000609021 HDDC2-003 retained_intron Homo_sapiens 0.00000000000002 86

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