C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 8783
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159764 Gm8783-001 ENSMUSG00000094388 10090 + 19:40622460-40622981 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverPlacentaENSMUST00000159764
Transcript ID Bladder Brain Liver Placenta
ENSMUST00000159764 0.020±0.00 1.154±0.00 0.786±0.12 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095J CIL_00095J_0002 VISTA 19:40075645-40678667
CIL_0007T2 CIL_0007T2_0002 VISTA 19:40167411-40768695
CIL_00067C CIL_00067C_0002 CGP 19:40596446-40741602

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370651 PTP4A1-004 protein_coding Homo_sapiens 0 821
ENST00000420539 PTP4A1P1-001 processed_pseudogene Homo_sapiens 0 577
ENST00000423476 PTP4A1P7-001 processed_pseudogene Homo_sapiens 0 654
ENST00000512479 PTP4A1P4-001 processed_pseudogene Homo_sapiens 0 396
ENST00000531034 PTP4A1P6-001 transcribed_processed_pseudogene Homo_sapiens 0 486
ENST00000554127 RP11-395B20.2-001 processed_pseudogene Homo_sapiens 5.60519e-45 183

Loading