C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase type IVA, member 1 pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531034 PTP4A1P6-001 ENSG00000254727 9606 + 11:86432098-86432575 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENST00000531034
Transcript ID Brain Heart
ENST00000531034 0.249±0.00 0.075±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122008 Gm13363-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000076587 Ptp4a1-005 protein_coding Mus_musculus 0 488
ENSMUST00000027232 Ptp4a1-001 protein_coding Mus_musculus 0 488
ENSMUST00000120920 Gm15801-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000159764 Gm8783-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000075251 Gm5582-201 processed_pseudogene Mus_musculus 0 475
ENSMUST00000153681 Ptp4a1-003 retained_intron Mus_musculus 0 370

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