C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471700 PSME2-003 ENSG00000100911 9606 - 14:24143366-24146579 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyMuscleENST00000471700
Transcript ID Colon Kidney Muscle
ENST00000471700 17.819±0.00 24.773±0.00 5.652±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K8 CIL_0001K8_0002 CGP 14:24138959-24147570
CIL_00031B CIL_00031B_0001 CGP 14:24143362-24160661

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161807 Psme2-001 protein_coding Mus_musculus 0 616
ENSMUST00000104958 Psme2b-001 protein_coding Mus_musculus 0 610
ENSMUST00000111378 Psme2-201 protein_coding Mus_musculus 0 566
ENSMUST00000159687 Psme2-002 protein_coding Mus_musculus 0 566
ENSMUST00000181249 Gm7928-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000161027 Psme2-007 retained_intron Mus_musculus 0 518
ENSMUST00000159282 Psme2-006 retained_intron Mus_musculus 0 351
ENSMUST00000162700 Psme2-009 retained_intron Mus_musculus 0 348
ENSMUST00000161573 Psme2-008 retained_intron Mus_musculus 0 302
ENSMUST00000162496 Psme2-003 retained_intron Mus_musculus 3e-22 110
ENSMUST00000159845 Psme2-004 retained_intron Mus_musculus 0.0000000000007 79

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