C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560370 PSME2-014 ENSG00000100911 9606 - 14:24143594-24146591 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartKidneyLiverLungPlacentaENST00000560370
Transcript ID Adipose Colon Heart Kidney Liver Lung Placenta
ENST00000560370 23.792±0.00 37.848±0.00 26.355±0.00 63.802±0.00 40.554±0.00 91.366±0.00 19.503±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K8 CIL_0001K8_0002 CGP 14:24138959-24147570
CIL_00031B CIL_00031B_0001 CGP 14:24143362-24160661

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161807 Psme2-001 protein_coding Mus_musculus 0 719
ENSMUST00000104958 Psme2b-001 protein_coding Mus_musculus 0 719
ENSMUST00000111378 Psme2-201 protein_coding Mus_musculus 0 699
ENSMUST00000181249 Gm7928-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000161027 Psme2-007 retained_intron Mus_musculus 0 556
ENSMUST00000159687 Psme2-002 protein_coding Mus_musculus 0 536
ENSMUST00000162700 Psme2-009 retained_intron Mus_musculus 0 416
ENSMUST00000161573 Psme2-008 retained_intron Mus_musculus 0 401
ENSMUST00000159282 Psme2-006 retained_intron Mus_musculus 0 374
ENSMUST00000162496 Psme2-003 retained_intron Mus_musculus 2e-22 110
ENSMUST00000159845 Psme2-004 retained_intron Mus_musculus 0.0000000000006 79

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