C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beta-site APP cleaving enzyme 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159970 Bace1-003 ENSMUSG00000032086 10090 + 9:45852723-45862219 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMusclePlacentaENSMUST00000159970
Transcript ID Brain Liver Muscle Placenta
ENSMUST00000159970 13.876±1.55 8.091±1.32 6.847±1.02 9.680±1.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0002 VISTA 9:45818249-46421546

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313005 BACE1-001 protein_coding Homo_sapiens 0 1668
ENST00000392937 BACE1-006 protein_coding Homo_sapiens 0 1668
ENST00000428381 BACE1-002 protein_coding Homo_sapiens 0 1203
ENST00000445823 BACE1-004 protein_coding Homo_sapiens 0 1291
ENST00000504995 BACE1-008 protein_coding Homo_sapiens 0 320
ENST00000509916 BACE1-010 retained_intron Homo_sapiens 0 566
ENST00000510630 BACE1-007 protein_coding Homo_sapiens 0 1242
ENST00000510915 BACE1-009 protein_coding Homo_sapiens 0 366
ENST00000513780 BACE1-003 protein_coding Homo_sapiens 0 1203
ENST00000514464 BACE1-005 processed_transcript Homo_sapiens 0 326
ENST00000528053 BACE1-013 protein_coding Homo_sapiens 0 1177
ENST00000530824 BACE1-016 retained_intron Homo_sapiens 0 726

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