C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beta-site APP-cleaving enzyme 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528053 BACE1-013 ENSG00000186318 9606 - 11:117287351-117316259 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverLungOvaryPlacentaENST00000528053
Transcript ID Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000528053 1.987±0.00 0.887±0.00 0.693±0.00 1.951±0.00 1.284±0.00 2.709±0.00 1.636±0.00 3.168±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004190 IEA aspartic-type endopeptidase activity
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078111 Bace1-002 protein_coding Mus_musculus 0 2471
ENSMUST00000034591 Bace1-001 protein_coding Mus_musculus 0 1297
ENSMUST00000159970 Bace1-003 retained_intron Mus_musculus 0 1177
ENSMUST00000162587 Bace1-006 protein_coding Mus_musculus 0 843
ENSMUST00000162559 Bace1-005 processed_transcript Mus_musculus 0 255
ENSMUST00000159499 Bace1-004 nonsense_mediated_decay Mus_musculus 0 235

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