C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: optic atrophy 1 (autosomal dominant)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361150 OPA1-201 ENSG00000198836 9606 + 3:193593144-193697810 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyOvaryPlacentaTestisENST00000361150
Transcript ID Bladder Breast Kidney Ovary Placenta Testis
ENST00000361150 1.393±0.00 2.361±0.00 1.753±0.00 1.224±0.39 0.520±0.00 1.797±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000N8 CIL_0000N8_0001 CGP 3:193402077-193697823
CIL_0008CV CIL_0008CV_0001 VISTA 3:193471570-194073544

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161186 Opa1-008 protein_coding Mus_musculus 0 3107
ENSMUST00000160597 Opa1-001 protein_coding Mus_musculus 0 2868
ENSMUST00000038867 Opa1-003 protein_coding Mus_musculus 0 2865
ENSMUST00000160475 Opa1-002 nonsense_mediated_decay Mus_musculus 0 2671
ENSMUST00000160153 Opa1-005 retained_intron Mus_musculus 0 1631
ENSMUST00000159036 Opa1-004 retained_intron Mus_musculus 0 1485
ENSMUST00000162240 Opa1-007 protein_coding Mus_musculus 0 846

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