C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF2 and NCK interacting kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160307 Tnik-007 ENSMUSG00000027692 10090 + 3:28263563-28668223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverOvaryENSMUST00000160307
Transcript ID Adrenal Brain Colon Heart Kidney Liver Ovary
ENSMUST00000160307 1.241±0.00 6.924±4.12 0.782±0.00 0.959±0.30 0.109±0.00 0.121±0.04 0.799±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070U CIL_00070U_0002 CGP 3:27938695-28675858
CIL_0007SJ CIL_0007SJ_0002 VISTA 3:28120093-28722161
CIL_00080K CIL_00080K_0002 VISTA 3:28128875-28733466
CIL_0008FL CIL_0008FL_0002 VISTA 3:28138282-28741962
CIL_000710 CIL_000710_0002 CGP 3:28263214-28728356

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005083 IEA small GTPase regulator activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007010 IEA cytoskeleton organization
GO:0007256 IEA activation of JNKK activity
GO:0031532 IEA actin cytoskeleton reorganization
GO:0035556 IEA intracellular signal transduction
GO:0046777 IEA protein autophosphorylation
GO:0048471 ISO perinuclear region of cytoplasm
GO:0048814 IEA regulation of dendrite morphogenesis
GO:0055037 ISO recycling endosome
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284483 TNIK-004 protein_coding Homo_sapiens 0 5374
ENST00000341852 TNIK-003 protein_coding Homo_sapiens 0 3363
ENST00000357327 TNIK-006 protein_coding Homo_sapiens 0 3576
ENST00000436636 TNIK-001 protein_coding Homo_sapiens 0 5873
ENST00000459881 TNIK-017 retained_intron Homo_sapiens 0 568
ENST00000460047 TNIK-007 protein_coding Homo_sapiens 0 2957
ENST00000464785 TNIK-016 processed_transcript Homo_sapiens 0 414
ENST00000465393 TNIK-002 protein_coding Homo_sapiens 0 254
ENST00000468757 TNIK-012 protein_coding Homo_sapiens 0 1323
ENST00000470834 TNIK-009 protein_coding Homo_sapiens 0 3437
ENST00000475336 TNIK-005 protein_coding Homo_sapiens 0 2957
ENST00000484051 TNIK-011 retained_intron Homo_sapiens 0 917
ENST00000487846 TNIK-015 retained_intron Homo_sapiens 0 573
ENST00000488470 TNIK-008 protein_coding Homo_sapiens 0 3096
ENST00000496492 TNIK-010 retained_intron Homo_sapiens 0 2538

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