C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kelch-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160860 Klhl3-001 ENSMUSG00000014164 10090 - 13:58004221-58113592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000160860
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000160860 0.291±0.04 0.321±0.16 0.580±0.17 0.322±0.16 0.714±0.18 1.451±0.23 0.250±0.00 0.527±0.35 0.160±0.08 1.137±0.43 0.111±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P1 CIL_0005P1_0002 CGP 13:57421195-58113592
CIL_0005OY CIL_0005OY_0002 CGP 13:58004221-58128556

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003779 IEA actin binding
GO:0003824 IEA catalytic activity
GO:0005829 ISS cytosol
GO:0005856 IEA cytoskeleton
GO:0016567 ISS protein ubiquitination
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0042787 ISS protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0050801 ISS ion homeostasis
GO:0070294 ISS renal sodium ion absorption
GO:0070936 ISS protein K48-linked ubiquitination
GO:0072156 ISS distal tubule morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309755 KLHL3-001 protein_coding Homo_sapiens 0 2446
ENST00000447439 KLHL3-009 retained_intron Homo_sapiens 0 394
ENST00000502381 KLHL3-007 processed_transcript Homo_sapiens 0 712
ENST00000504208 KLHL3-005 nonsense_mediated_decay Homo_sapiens 0 745
ENST00000504496 KLHL3-006 processed_transcript Homo_sapiens 0 484
ENST00000505853 KLHL3-002 protein_coding Homo_sapiens 0 1461
ENST00000506491 KLHL3-004 protein_coding Homo_sapiens 0 1873
ENST00000506873 KLHL3-008 processed_transcript Homo_sapiens 0 710
ENST00000508657 KLHL3-003 protein_coding Homo_sapiens 0 2100
ENST00000509694 KLHL3-014 retained_intron Homo_sapiens 6.02558e-44 182
ENST00000510529 KLHL3-013 processed_transcript Homo_sapiens 0 455
ENST00000512977 KLHL3-010 processed_transcript Homo_sapiens 0 283
ENST00000515334 KLHL3-012 processed_transcript Homo_sapiens 0 488

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