C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005OY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146021-ENSG00000177733 CGP 9606 5:137617500-137754376
GeneTranscriptPositionBiotype
ENSG00000146021 (KLHL3)
kelch-like family member 3 		ENST00000309755 (KLHL3-001) 137617500-137736090 protein_coding
ENST00000447439 (KLHL3-009) 137621221-137629943 retained_intron
ENST00000502381 (KLHL3-007) 137634044-137673897 processed_transcript
ENST00000504208 (KLHL3-005) 137621939-137706427 nonsense_mediated_decay
ENST00000504496 (KLHL3-006) 137660711-137692685 processed_transcript
ENST00000505853 (KLHL3-002) 137637294-137736015 protein_coding
ENST00000506491 (KLHL3-004) 137617500-137706436 protein_coding
ENST00000506873 (KLHL3-008) 137621502-137672927 processed_transcript
ENST00000508657 (KLHL3-003) 137617500-137721310 protein_coding
ENST00000509694 (KLHL3-014) 137617659-137628680 retained_intron
ENST00000510529 (KLHL3-013) 137677417-137698383 processed_transcript
ENST00000512977 (KLHL3-010) 137706050-137735858 processed_transcript
ENST00000514149 (KLHL3-011) 137671767-137673851 processed_transcript
ENST00000515334 (KLHL3-012) 137672754-137706139 processed_transcript
ENSG00000177733 (HNRNPA0)
heterogeneous nuclear ribonucleoprotein A0 		ENST00000314940 (HNRNPA0-001) 137750427-137754376 protein_coding
ENSG00000270237 (RP11-381K20.5)
 ENST00000603314 (RP11-381K20.5-001) 137745651-137746151 lincRNA
CIL_0005OY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014164-ENSMUSG00000007836 CGP 10090 13:58004221-58128556
GeneTranscriptPositionBiotype
ENSMUSG00000007836 (Hnrnpa0)
heterogeneous nuclear ribonucleoprotein A0 		ENSMUST00000007980 (Hnrnpa0-201) 58125879-58128556 protein_coding
ENSMUSG00000014164 (Klhl3)
kelch-like 3 		ENSMUST00000091583 (Klhl3-201) 58004957-58102428 protein_coding
ENSMUST00000160860 (Klhl3-001) 58004221-58113592 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OY_0001ENSG00000146021ENST00000309755ENST00000447439ENST00000502381ENST00000504208ENST00000504496ENST00000505853ENST00000506491ENST00000506873ENST00000508657ENST00000509694ENST00000510529ENST00000512977ENST00000514149ENST00000515334ENSG00000177733ENST00000314940ENSG00000270237ENST00000603314CIL_0005OY_0002ENSMUSG00000007836ENSMUST00000007980ENSMUSG00000014164ENSMUST00000091583ENSMUST00000160860
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OY_0001ENSG00000146021ENST00000309755ENST00000447439ENST00000504208ENST00000505853ENST00000506491ENST00000508657ENST00000510529ENSG00000177733ENST00000314940ENSG00000270237ENST00000603314CIL_0005OY_0002ENSMUSG00000007836ENSMUST00000007980ENSMUSG00000014164ENSMUST00000091583ENSMUST00000160860
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146021 ENST00000309755 0.812±0.00 1.274±0.00 N/A 1.373±0.45 0.500±0.00 0.141±0.06 1.931±0.43 N/A 0.288±0.00 N/A N/A 0.404±0.17 0.117±0.01 0.900±0.63
ENST00000447439 N/A N/A N/A N/A N/A 0.211±0.00 N/A N/A 0.855±0.00 N/A N/A 0.868±0.00 N/A N/A
ENST00000502381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504208 N/A N/A N/A N/A N/A N/A N/A N/A 0.798±0.00 N/A N/A N/A N/A N/A
ENST00000504496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505853 N/A N/A N/A N/A N/A N/A N/A 0.511±0.00 N/A N/A 0.417±0.00 N/A N/A N/A
ENST00000506491 N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A 0.985±0.00
ENST00000506873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508657 N/A N/A N/A 0.932±0.00 0.380±0.00 N/A N/A N/A N/A 0.810±0.00 N/A N/A N/A 0.179±0.00
ENST00000509694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.439±0.00 N/A N/A N/A
ENST00000512977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177733 ENST00000314940 29.375±0.00 28.608±0.00 4.942±0.00 13.340±5.08 13.428±6.00 13.799±3.80 6.272±3.64 9.411±4.47 8.066±0.96 17.578±9.61 8.746±2.24 26.661±14.84 31.024±6.45 20.249±4.72
ENSG00000270237 ENST00000603314 0.948±0.00 0.362±0.00 1.130±0.00 1.882±1.30 0.284±0.00 0.417±0.04 0.230±0.15 0.117±0.00 0.021±0.00 0.731±0.63 0.146±0.00 0.625±0.11 0.122±0.02 0.510±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007836 ENSMUST00000007980 50.886±28.78 108.793±28.25 45.972±10.66 130.670±89.46 54.852±32.91 72.595±5.38 15.446±1.99 33.631±4.67 44.409±24.98 50.305±7.60 10.230±0.87 127.645±54.23 35.358±20.09 27.321±12.93
ENSMUSG00000014164 ENSMUST00000091583 N/A 0.461±0.12 N/A N/A 0.316±0.05 0.179±0.01 0.443±0.10 N/A 0.593±0.36 N/A 0.071±0.00 1.306±0.47 N/A 1.483±0.19
ENSMUST00000160860 0.291±0.04 0.321±0.16 N/A N/A 0.580±0.17 0.322±0.16 0.714±0.18 1.451±0.23 0.250±0.00 0.527±0.35 0.160±0.08 1.137±0.43 0.111±0.03 N/A

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